New Publication: Collision cross section calibrants for negative ion mode traveling wave ion mobility-mass spectrometry

malic_acid_tocCollision cross section calibrants for negative ion mode traveling wave ion mobility-mass spectrometryJay G. Forsythe, Anton S. Petrov, Chelsea A. Walker, Samuel J. Allen, Jarrod S. Pellissier, Matthew F. Bush, Nicholas V. Hud, Facundo M. Fernández. Analyst 2015, 140, 6853-6861. (Link|PUBMED)

Abstract. Unlike traditional drift-tube ion mobility-mass spectrometry, traveling-wave ion mobility-mass spectrometry typically requires calibration in order to generate collision cross section (CCS) values. Although this has received a significant amount of attention for positive-ion mode analysis, little attention has been paid for CCS calibration in negative ion mode. Here, we provide drift-tube CCS values for [M − H] ions of two calibrant series, polyalanine and polymalic acid, and evaluate both types of calibrants in terms of the accuracy and precision of the traveling-wave ion mobility CCS values that they produce.

  • For a perspective on this work, please see the feature that appeared on the main page for NASA Astrobiology (Link)

Sam Allen at US HUPO

US HUPO                   pikes place

Sam Allen will present the following poster and talk at the US HUPO 10th Annual Conference: Frontiers in Proteomics which takes place at The Westin Seattle Hotel in Seattle, WA from April 6-9, 2014.

  • Manipulating the Charge States of Native-Like Proteins and Protein Complexes: Charge Reduction, Supercharging, and Insights into Electrospray Mechanisms Samuel J. Allen, Alicia M. Schwartz, Christiane N. Stachl, Matthew F. Bush (Poster #082, Lightning Talk April 8 2:25 pm)

Bush Lab at the Cascadia Proteomics Symposium

Cascadia Proteomics Symposium

The Bush Lab and collaborators are presenting the following talks at the Cascadia Proteomics Symposium, which takes place at the Institute for Systems Biology in Seattle from July 19-21.

  • Samuel T. Marionni; Weiman Xing; Ning Zheng; Matthew F. Bush. Ion Mobility Mass Spectrometry of a Circadian Clock Protein Complex Reveals a Ligand-Dependent Conformational Switch (Thursday @ 4:40 pm)
  • Samuel J. Allen; Samuel T. Marionni; Kevin Giles; Tony Gilbert; Matthew F. Bush. Design and Characterization of a New Ion Mobility Cell (Saturday @ 9:50 am)

Bush Lab at ASMS

asms_vancouverThe Bush Lab and collaborators are presenting the following posters at the American Society for Mass Spectrometry annual meeting in Vancouver. Abstracts may be found by searching at for “Bush” using the conference planner.

  • Samuel J. Allen; Samuel T. Marionni; Kevin Giles; Tony Gilbert; Matthew F. Bush. Design and Characterization of a New Ion Mobility Cell for Protein Complexes (Monday, Poster 634)
  • Samuel T. Marionni; Weiman Xing; Ning Zheng; Matthew F. Bush. Ion Mobility Mass Spectrometry of a Circadian Clock Protein Complex Reveals a Ligand-Dependent Conformational Switch (Wednesday, Poster 244)
  • Lucas Monkkonen; Yue Huang; Sung Hwan Yoon; John Edgar; Eri Nakatani; Carlos E. Catalano; Matthew F. Bush; David R. Goodlett. Native Mass Spectrometry of Noncovalent Protein Complexes by Surface Acoustic Wave Nebulization (Tuesday, Poster 261)

Matt Bush and Brandon Ruotolo will also co-chair the Ion Mobility MS Workshop on Applying Ion Mobility-Mass Spectrometry to Challenges in Proteomics and Systems Biology (Wednesday, 5:45-7:00, Room 220-222).

  • Utilizing IMS-MS Separations in Proteomic Studies Erin Baker (Pacific Northwest National Labs)
  • Strategies and Challenges in Dynamic Systems Biology Analysis Using Structural Mass Spectrometry Jeffrey R. Enders, Christina C. Marasco, Kevin T. Seale, John P. Wikswo, John A. McLean (Vanderbilt University)
  • Realization of the Promise of IM-MS in Differential Expression Proteomics Erik J. Soderblom, J. Will Thompson, Matt W. Foster, Meredith E. Turner, M. Arthur Moseley (Duke University)
  • Quantitative IM-MS^E Proteomics Brent Martin (University of Michigan)

We look forward to seeing everyone in Vancouver!

Week 1

We took possession of our labs and offices this week. Lots of work remaining, but things are beginning to take shape!

Full Lab
Whole Lab.  Note the really interesting air supply system that minimizes temperature differences within the lab.

 

Bench Space, Before

 

Bench Space, After

 

Future Site of Mass Spectrometer

 

Sam’s Office